BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008G03SP1|AL425916
(779 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1743 1380 0.0
>3x_Contig1743
Length = 20172
Score = 1380 bits (689), Expect = 0.0
Identities = 748/779 (96%)
Strand = Plus / Minus
Query: 1 atcgcgctgtagctagaaataatacttccattattacagttgaagaatggaataaccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14804 atcgcgctgtagctagaaataatacttccattattacagttgaagaatggaataaccttt 14745
Query: 61 caagtatcatcttaccattattaaaatgtttgcaacacactttggataaggctttagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14744 caagtatcatcttaccattattaaaatgtttgcaacacactttggataaggctttagcag 14685
Query: 121 acaaatgcgctaaacwaatgaaactaaggctatgtaaggbtaaggcaactattgcaaaag 180
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 14684 acaaatgcgctaaactaatgaaactaaggctatgtaaggttaaggcaactattgcaaaag 14625
Query: 181 aagagaagacagtmacttcagaaatcyttcatttactggaaaaagtccataagcycataa 240
||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 14624 aagagaagacagttacttcagaaatctttcatttactggaaaaagtccataagctcataa 14565
Query: 241 tgactgccaagccaggacaatttcaacaactgtttttttccacctgttctttagcctcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14564 tgactgccaagccaggacaatttcaacaactgtttttttccacctgttctttagcctcat 14505
Query: 301 tgtttttgtccaagtcatatcyctccagcggtggttctcatgagaacytgattgancyat 360
||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||| | ||
Sbjct: 14504 tgtttttgtccaagttatatctctccagcggtggttctcatgagaacttgattgatctat 14445
Query: 361 atgcagacacgtcgaaagcytggatgaaagacggaaaatgcacagttaatttcttcattg 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 14444 atgcagacacgtcgaaagcttggatgaaagacggaaaatgcacagttaatttcttcattg 14385
Query: 421 atttttcaaactggcttcaaacaaagagagcygcataattkagtaatatcgancgaactc 480
||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||
Sbjct: 14384 atttttcaaactggcttcaaacaaagagagctgcataatttagtaatatcgatcgaactc 14325
Query: 481 ggggtgtcatcaagcttttttaaacttagcactaacagaacaatattatgaaaagaaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14324 ggggtgtcatcaagcttttttaaacttagcactaacagaacaatattatgaaaagaaaga 14265
Query: 541 ctannantcgnaccagnannccnaaangncagtcttcctcttatgtttttbtttgcgtcc 600
||| | ||| || || | || ||| | ||||||||||||||||||||| |||| ||
Sbjct: 14264 ctattattcgtactagtattcctaaatgtcagtcttcctcttatgtttttttttgtttct 14205
Query: 601 ctgtctcatacgtaacgctcaatagcatcaacttatagaaaattatagacattaacttaa 660
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14204 ttgtttcatacgtaacgctcaatagcatcaacttatagaaaattatagacattaacttaa 14145
Query: 661 ctattctaaggttgtaatatcgaaatcagctggcggttgcggaggacggacaatcttatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14144 ctattctaaggttgtaatatcgaaatcagctggcggttgcggaggacggacaatcttatt 14085
Query: 721 cgctggtttccatatttgaagaacgttttcttcttcgacgctgcacattagccatggaa 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14084 cgctggtttccatatttgaagaacgttttcttcttcgacgctgcacattagccatggaa 14026
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5731
Number of Sequences: 1807
Number of extensions: 5731
Number of successful extensions: 129
Number of sequences better than 1.0e-20: 1
length of query: 779
length of database: 10,358,551
effective HSP length: 16
effective length of query: 763
effective length of database: 10,329,639
effective search space: 7881514557
effective search space used: 7881514557
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)